SamTagCodec

#include <pbbam/SamTagCodec.h>
class PacBio::BAM::SamTagCodec

The SamTagCodec class provides text-based encoding/decoding of BAM tag data.

Note
SamTagCodec is mostly an implementation and/or testing detail, and may be removed from the public API.

Tag Collection Methods

static TagCollection Decode(const std::string &tagString)

Creates a TagCollection from SAM-formatted tag data.

Return
resulting tag collection
Parameters
  • tagString: SAM-formmated string

static std::string Encode(const PacBio::BAM::TagCollection &tags)

Creates SAM-formatted string from a TagCollection.

Return
SAM-formatted string
Parameters